Ten novel psychrophilic Flavobacterium species from Tibetan Plateau glaciers define a cryospheric lineage with global cold-origin relatives

来自青藏高原冰川的十种新型嗜冷黄杆菌属物种定义了一个冰冻圈谱系,其近缘种起源于全球寒冷地区。

阅读:1

Abstract

Twenty-three novel psychrophilic bacteria, represented by the type strains LB2P44(T), LB2P6(T), LB1P62(T), LB3P6(T), LS1P3(T), XS2P39(T), XS1P32(T), ZB4P13(T), ZS1P14(T) and GT2P42(T), were isolated from ice, cryoconite and meltwater of five Tibetan Plateau glaciers. All strains were Gram-stain-negative, aerobic, rod-shaped and psychrophilic, with optimal growth at 14-20 °C and pH 7.0. 16S rRNA gene sequence similarities to validly named Flavobacterium species ranged from 98.12% to 99.56%. Phylogenomic analysis of 81 concatenated core genes positioned the 23 strains (comprising the ten novel species) within a robust monophyletic clade - the 'Cryospheric Lineage' - together with 31 other psychrophilic type strains predominantly from glaciers, permafrost and polar regions. Average nucleotide identity (ANI) values of ≤94.4% and digital DNA-DNA hybridization (dDDH) values of ≤57.3% against closest relatives were below species thresholds (95-96% ANI, 70% dDDH). Major fatty acids were iso-C(15:0) (8.1-16.8%), iso-C(15:0) 3-OH (3-hydroxy, 5.2-16.0%) and summed feature 3 (C(16:1)  ω7c and/or C(16:1)  ω6c, 10.1-27.6%), with elevated branched-chain and unsaturated components typical of cold adaptation. Polyphasic taxonomic evidence supports the description of ten novel species within the genus Flavobacterium: Flavobacterium amylolyticum sp. nov. (LB2P44(T)=CGMCC 1.11256(T)=NBRC 114815(T)), Flavobacterium glucosi sp. nov. (LB2P6(T)=CGMCC 1.11263(T)=NBRC 114816(T)), Flavobacterium esculini sp. nov. (LB1P62(T)=CGMCC 1.11346(T)=NBRC 114817(T)), Flavobacterium labens sp. nov. (LB3P6(T)=CGMCC 1.11428(T)=NBRC 114818(T)), Flavobacterium pasteuri sp. nov. (LS1P3(T)=CGMCC 1.11474(T)=NBRC 114821(T)), Flavobacterium rhamnosi sp. nov. (XS2P39(T)=CGMCC 1.23204(T)=NBRC 115054(T)), Flavobacterium frigidum sp. nov. (XS1P32(T)=CGMCC 1.23370(T)=NBRC 115055(T)), Flavobacterium glycogeni sp. nov. (ZB4P13(T)=CGMCC 1.24050(T)=NBRC 115056(T)), Flavobacterium kochi sp. nov. (ZS1P14(T)=CGMCC 1.24093(T)=NBRC 114828(T)) and Flavobacterium cryophilum sp. nov. (GT2P42(T)=CGMCC 1.24821(T)=NBRC 114831(T)).

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。