Isolation and genetic characterization of novel bovine parechoviruses from Japanese black cattle

日本黑牛新型牛副肠孤病毒的分离及遗传鉴定

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作者:Mami Oba, Mayo Shimotori, Natsuko Teshima, Lisa Yamaguchi, Hitoshi Takemae, Shoichi Sakaguchi, Hiroho Ishida, Hironobu Murakami, Tetsuya Mizutani, Makoto Nagai

Abstract

Novel bovine parechoviruses (Bo ParVs) were isolated from the feces of Japanese black cattle. Phylogenetic analysis revealed that the novel Bo ParVs formed an independent cluster, exhibiting 72.2-75.6% nucleotide sequence identity to previous Bo ParVs, suggesting that they represent a new genotype. Bo ParVs, including the novel Bo ParVs, shared sequence similarity with each other in the 3' untranslated region (3'UTR) and exhibited low sequence similarity (<38.9% identity) to other parechoviruses. However, a secondary structure prediction of the 3'UTR revealed that the Bo ParVs shared conserved motifs in domain 2 with parechovirus B and E, suggesting some evolutionary constrains in this region.

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