Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3(T))

有机卤化物呼吸脱卤单胞菌典型菌株 (IP3-3(T)) 的基因组序列

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作者:Trent A Key, Dray P Richmond, Kimberly S Bowman, Yong-Joon Cho, Jongsik Chun, Milton S da Costa, Fred A Rainey, William M Moe

Abstract

Dehalogenimonas alkenigignens IP3-3(T) is a strictly anaerobic, mesophilic, Gram negative staining bacterium that grows by organohalide respiration, coupling the oxidation of H2 to the reductive dehalogenation of polychlorinated alkanes. Growth has not been observed with any non-polyhalogenated alkane electron acceptors. Here we describe the features of strain IP3-3(T) together with genome sequence information and its annotation. The 1,849,792 bp high-quality-draft genome contains 1936 predicted protein coding genes, 47 tRNA genes, a single large subunit rRNA (23S-5S) locus, and a single, orphan, small unit rRNA (16S) locus. The genome contains 29 predicted reductive dehalogenase genes, a large majority of which lack cognate genes encoding membrane anchoring proteins.

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