The facial triad in the α-ketoglutarate dependent oxygenase FIH: A role for sterics in linking substrate binding to O(2) activation

α-酮戊二酸依赖性加氧酶FIH中的面部三联体:空间位阻在连接底物结合和O₂活化中的作用

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Abstract

The factor inhibiting hypoxia inducible factor-1α (FIH) is a nonheme Fe(II)/αKG oxygenase using a 2-His-1-Asp facial triad. FIH activates O(2) via oxidative decarboxylation of α-ketoglutarate (αKG) to generate an enzyme-based oxidant which hydroxylates the Asn(803) residue within the C-terminal transactivation domain (CTAD) of HIF-1α. Tight coupling of these two sequential reactions requires a structural linkage between the Fe(II) and the substrate binding site to ensure that O(2) activation occurs after substrate binds. We tested the hypothesis that the facial triad carboxylate (Asp(201)) of FIH linked substrate binding and O(2) binding sites. Asp(201) variants of FIH were constructed and thoroughly characterized in vitro using steady-state kinetics, crystallography, autohydroxylation, and coupling measurements. Our studies revealed each variant activated O(2) with a catalytic efficiency similar to that of wild-type (WT) FIH (k(cat)aK(M(O(2)))=0.17μM(-1)min(-1)), but led to defects in the coupling of O(2) activation to substrate hydroxylation. Steady-state kinetics showed similar catalytic efficiencies for hydroxylation by WT-FIH (k(cat)/K(M(CTAD))=0.42μM(-1)min(-1)) and D201G (k(cat)/K(M(CTAD))=0.34μM(-1)min(-1)); hydroxylation by D201E was greatly impaired, while hydroxylation by D201A was undetectable. Analysis of the crystal structure of the D201E variant revealed steric crowding near the diffusible ligand site supporting a role for sterics from the facial triad carboxylate in the O(2) binding order. Our data support a model in which the facial triad carboxylate Asp(201) provides both steric and polar contacts to favor O(2) access to the Fe(II) only after substrate binds, leading to coupled turnover in FIH and other αKG oxygenases.

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