Multi-omics after O-GlcNAc alteration identified cellular processes promoting aneuploidy after loss of O-GlcNAc transferase

O-GlcNAc 改变后的多组学研究确定了 O-GlcNAc 转移酶缺失后促进非整倍体的细胞过程

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作者:Samuel S Boyd, Dakota R Robarts, Khue Nguyen, Maite Villar, Ibtihal M Alghusen, Manasi Kotulkar, Aspin Denson, Halyna Fedosyuk, Stephen A Whelan, Norman C Y Lee, John Hanover, Wagner B Dias, Ee Phie Tan, Steven R McGreal, Antonio Artigues, Russell H Swerdlow, Jeffrey A Thompson, Udayan Apte, Chad Sl

Conclusion

These data show how a multi-Omics platform can disentangle the pleotropic nature of O-GlcNAc to discern how OGT fine-tunes multiple cellular pathways involved in aneuploidy.

Objective

Pharmacologic or genetic manipulation of O-GlcNAcylation, an intracellular, single sugar post-translational modification, are difficult to interpret due to the pleotropic nature of O-GlcNAc and the vast signaling pathways it regulates. Method: To address the pleotropic nature of O-GlcNAc, we employed either OGT (O-GlcNAc transferase), OGA (O-GlcNAcase) liver knockouts, or pharmacological inhibition of OGA coupled with multi-Omics analysis and bioinformatics.

Results

We identified numerous genes, proteins, phospho-proteins, or metabolites that were either inversely or equivalently changed between conditions. Moreover, we identified pathways in OGT knockout samples associated with increased aneuploidy. To test and validate these pathways, we induced liver growth in OGT knockouts by partial hepatectomy. OGT knockout livers showed a robust aneuploidy phenotype with disruptions in mitosis, nutrient sensing, protein metabolism/amino acid metabolism, stress response, and HIPPO signaling demonstrating how OGT is essential in controlling aneuploidy pathways.

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