Three-dimensional virtual histology of the cerebral cortex based on phase-contrast X-ray tomography

基于相位对比X射线断层扫描的大脑皮层三维虚拟组织学

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作者:Marina Eckermann, Franziska van der Meer, Peter Cloetens, Torben Ruhwedel, Wiebke Möbius, Christine Stadelmann, Tim Salditt

Abstract

In this work, we optimize the setups and experimental parameters of X-ray phase-contrast computed-tomography for the three-dimensional imaging of the cyto- and myeloarchitecture of cerebral cortex, including both human and murine tissue. We present examples for different optical configurations using state-of-the art synchrotron instruments for holographic tomography, as well as compact laboratory setups for phase-contrast tomography in the direct contrast (edge-enhancement) regime. Apart from unstained and paraffin-embedded tissue, we tested hydrated tissue, as well as heavy metal stained and resin-embedded tissue using two different protocols. Further, we show that the image quality achieved allows to assess the neuropathology of multiple sclerosis in a biopsy sample collected during surgery.

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