日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

An Expanded Registry of Candidate cis-Regulatory Elements for Studying Transcriptional Regulation

用于研究转录调控的候选顺式调控元件扩展注册库

Moore, Jill E; Pratt, Henry E; Fan, Kaili; Phalke, Nishigandha; Fisher, Jonathan; Elhajjajy, Shaimae I; Andrews, Gregory; Gao, Mingshi; Shedd, Nicole; Fu, Yu; Lacadie, Matthew C; Meza, Jair; Ganna, Mohit; Choudhury, Eva; Swofford, Ross; Farrell, Nina P; Pampari, Anusri; Ramalingam, Vivekanandan; Reese, Fairlie; Borsari, Beatrice; Yu, Michelle; Wattenberg, Eve; Ruiz-Romero, Marina; Razavi-Mohseni, Milad; Xu, Jinrui; Galeev, Timur; Beer, Michael A; Guigó, Roderic; Gerstein, Mark; Engreitz, Jesse; Ljungman, Mats; Reddy, Timothy E; Snyder, Michael P; Epstein, Charles B; Gaskell, Elizabeth; Bernstein, Bradley E; Dickel, Diane E; Visel, Axel; Pennacchio, Len A; Mortazavi, Ali; Kundaje, Anshul; Weng, Zhiping

The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models

EN-TEx资源库包含多组织个体表观基因组和变异影响模型

Rozowsky, Joel; Gao, Jiahao; Borsari, Beatrice; Yang, Yucheng T; Galeev, Timur; Gürsoy, Gamze; Epstein, Charles B; Xiong, Kun; Xu, Jinrui; Li, Tianxiao; Liu, Jason; Yu, Keyang; Berthel, Ana; Chen, Zhanlin; Navarro, Fabio; Sun, Maxwell S; Wright, James; Chang, Justin; Cameron, Christopher J F; Shoresh, Noam; Gaskell, Elizabeth; Drenkow, Jorg; Adrian, Jessika; Aganezov, Sergey; Aguet, François; Balderrama-Gutierrez, Gabriela; Banskota, Samridhi; Corona, Guillermo Barreto; Chee, Sora; Chhetri, Surya B; Cortez Martins, Gabriel Conte; Danyko, Cassidy; Davis, Carrie A; Farid, Daniel; Farrell, Nina P; Gabdank, Idan; Gofin, Yoel; Gorkin, David U; Gu, Mengting; Hecht, Vivian; Hitz, Benjamin C; Issner, Robbyn; Jiang, Yunzhe; Kirsche, Melanie; Kong, Xiangmeng; Lam, Bonita R; Li, Shantao; Li, Bian; Li, Xiqi; Lin, Khine Zin; Luo, Ruibang; Mackiewicz, Mark; Meng, Ran; Moore, Jill E; Mudge, Jonathan; Nelson, Nicholas; Nusbaum, Chad; Popov, Ioann; Pratt, Henry E; Qiu, Yunjiang; Ramakrishnan, Srividya; Raymond, Joe; Salichos, Leonidas; Scavelli, Alexandra; Schreiber, Jacob M; Sedlazeck, Fritz J; See, Lei Hoon; Sherman, Rachel M; Shi, Xu; Shi, Minyi; Sloan, Cricket Alicia; Strattan, J Seth; Tan, Zhen; Tanaka, Forrest Y; Vlasova, Anna; Wang, Jun; Werner, Jonathan; Williams, Brian; Xu, Min; Yan, Chengfei; Yu, Lu; Zaleski, Christopher; Zhang, Jing; Ardlie, Kristin; Cherry, J Michael; Mendenhall, Eric M; Noble, William S; Weng, Zhiping; Levine, Morgan E; Dobin, Alexander; Wold, Barbara; Mortazavi, Ali; Ren, Bing; Gillis, Jesse; Myers, Richard M; Snyder, Michael P; Choudhary, Jyoti; Milosavljevic, Aleksandar; Schatz, Michael C; Bernstein, Bradley E; Guigó, Roderic; Gingeras, Thomas R; Gerstein, Mark

An integrative ENCODE resource for cancer genomics

癌症基因组学综合性ENCODE资源

Zhang, Jing; Lee, Donghoon; Dhiman, Vineet; Jiang, Peng; Xu, Jie; McGillivray, Patrick; Yang, Hongbo; Liu, Jason; Meyerson, William; Clarke, Declan; Gu, Mengting; Li, Shantao; Lou, Shaoke; Xu, Jinrui; Lochovsky, Lucas; Ung, Matthew; Ma, Lijia; Yu, Shan; Cao, Qin; Harmanci, Arif; Yan, Koon-Kiu; Sethi, Anurag; Gürsoy, Gamze; Schoenberg, Michael Rutenberg; Rozowsky, Joel; Warrell, Jonathan; Emani, Prashant; Yang, Yucheng T; Galeev, Timur; Kong, Xiangmeng; Liu, Shuang; Li, Xiaotong; Krishnan, Jayanth; Feng, Yanlin; Rivera-Mulia, Juan Carlos; Adrian, Jessica; Broach, James R; Bolt, Michael; Moran, Jennifer; Fitzgerald, Dominic; Dileep, Vishnu; Liu, Tingting; Mei, Shenglin; Sasaki, Takayo; Trevilla-Garcia, Claudia; Wang, Su; Wang, Yanli; Zang, Chongzhi; Wang, Daifeng; Klein, Robert J; Snyder, Michael; Gilbert, David M; Yip, Kevin; Cheng, Chao; Yue, Feng; Liu, X Shirley; White, Kevin P; Gerstein, Mark

Multi-platform discovery of haplotype-resolved structural variation in human genomes

利用多平台发现人类基因组中单倍型解析的结构变异

Chaisson, Mark J P; Sanders, Ashley D; Zhao, Xuefang; Malhotra, Ankit; Porubsky, David; Rausch, Tobias; Gardner, Eugene J; Rodriguez, Oscar L; Guo, Li; Collins, Ryan L; Fan, Xian; Wen, Jia; Handsaker, Robert E; Fairley, Susan; Kronenberg, Zev N; Kong, Xiangmeng; Hormozdiari, Fereydoun; Lee, Dillon; Wenger, Aaron M; Hastie, Alex R; Antaki, Danny; Anantharaman, Thomas; Audano, Peter A; Brand, Harrison; Cantsilieris, Stuart; Cao, Han; Cerveira, Eliza; Chen, Chong; Chen, Xintong; Chin, Chen-Shan; Chong, Zechen; Chuang, Nelson T; Lambert, Christine C; Church, Deanna M; Clarke, Laura; Farrell, Andrew; Flores, Joey; Galeev, Timur; Gorkin, David U; Gujral, Madhusudan; Guryev, Victor; Heaton, William Haynes; Korlach, Jonas; Kumar, Sushant; Kwon, Jee Young; Lam, Ernest T; Lee, Jong Eun; Lee, Joyce; Lee, Wan-Ping; Lee, Sau Peng; Li, Shantao; Marks, Patrick; Viaud-Martinez, Karine; Meiers, Sascha; Munson, Katherine M; Navarro, Fabio C P; Nelson, Bradley J; Nodzak, Conor; Noor, Amina; Kyriazopoulou-Panagiotopoulou, Sofia; Pang, Andy W C; Qiu, Yunjiang; Rosanio, Gabriel; Ryan, Mallory; Stütz, Adrian; Spierings, Diana C J; Ward, Alistair; Welch, AnneMarie E; Xiao, Ming; Xu, Wei; Zhang, Chengsheng; Zhu, Qihui; Zheng-Bradley, Xiangqun; Lowy, Ernesto; Yakneen, Sergei; McCarroll, Steven; Jun, Goo; Ding, Li; Koh, Chong Lek; Ren, Bing; Flicek, Paul; Chen, Ken; Gerstein, Mark B; Kwok, Pui-Yan; Lansdorp, Peter M; Marth, Gabor T; Sebat, Jonathan; Shi, Xinghua; Bashir, Ali; Ye, Kai; Devine, Scott E; Talkowski, Michael E; Mills, Ryan E; Marschall, Tobias; Korbel, Jan O; Eichler, Evan E; Lee, Charles

exceRpt: A Comprehensive Analytic Platform for Extracellular RNA Profiling

exceRpt:用于细胞外RNA分析的综合分析平台

Rozowsky, Joel; Kitchen, Robert R; Park, Jonathan J; Galeev, Timur R; Diao, James; Warrell, Jonathan; Thistlethwaite, William; Subramanian, Sai L; Milosavljevic, Aleksandar; Gerstein, Mark

Allele-specific epigenome maps reveal sequence-dependent stochastic switching at regulatory loci

等位基因特异性表观基因组图谱揭示了调控位点上序列依赖性的随机转换

Onuchic, Vitor; Lurie, Eugene; Carrero, Ivenise; Pawliczek, Piotr; Patel, Ronak Y; Rozowsky, Joel; Galeev, Timur; Huang, Zhuoyi; Altshuler, Robert C; Zhang, Zhizhuo; Harris, R Alan; Coarfa, Cristian; Ashmore, Lillian; Bertol, Jessica W; Fakhouri, Walid D; Yu, Fuli; Kellis, Manolis; Gerstein, Mark; Milosavljevic, Aleksandar

FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods.

FusorSV:一种用于优化结合来自多种结构变异检测方法的数据的算法

Becker Timothy, Lee Wan-Ping, Leone Joseph, Zhu Qihui, Zhang Chengsheng, Liu Silvia, Sargent Jack, Shanker Kritika, Mil-Homens Adam, Cerveira Eliza, Ryan Mallory, Cha Jane, Navarro Fabio C P, Galeev Timur, Gerstein Mark, Mills Ryan E, Shin Dong-Guk, Lee Charles, Malhotra Ankit

Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development

用于开发中的唾液RNA测序数据生物信息学分析的新方法

Kaczor-Urbanowicz, Karolina Elzbieta; Kim, Yong; Li, Feng; Galeev, Timur; Kitchen, Rob R; Gerstein, Mark; Koyano, Kikuye; Jeong, Sung-Hee; Wang, Xiaoyan; Elashoff, David; Kang, So Young; Kim, Su Mi; Kim, Kyoung; Kim, Sung; Chia, David; Xiao, Xinshu; Rozowsky, Joel; Wong, David T W

A uniform survey of allele-specific binding and expression over 1000-Genomes-Project individuals

对千人基因组计划个体等位基因特异性结合和表达进行统一调查

Chen, Jieming; Rozowsky, Joel; Galeev, Timur R; Harmanci, Arif; Kitchen, Robert; Bedford, Jason; Abyzov, Alexej; Kong, Yong; Regan, Lynne; Gerstein, Mark

Reads meet rotamers: structural biology in the age of deep sequencing

读取序列与旋转异构体相遇:深度测序时代的结构生物学

Sethi, Anurag; Clarke, Declan; Chen, Jieming; Kumar, Sushant; Galeev, Timur R; Regan, Lynne; Gerstein, Mark