日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Evaluation of the Ultima Genomics UG 100 sequencer for low-cost, high-sensitivity metagenomic pathogen detection from cerebrospinal fluid

评估 Ultima Genomics UG 100 测序仪在脑脊液中低成本、高灵敏度宏基因组病原体检测方面的应用

Shean, Ryan C; Tardif, Keith D; Rangel, Alexandra; Dutrschi, Jacob; Bogumil, David; Cruse, Alix; Hernandez, Samm; Iremadze, Nika; Pollock, Sarah; Lipson, Doron; Bradley, Benjamin T

Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens

利用可扩展的单细胞扰动筛选系统地重建分子通路特征

Jiang, Longda; Dalgarno, Carol; Papalexi, Efthymia; Mascio, Isabella; Wessels, Hans-Hermann; Yun, Huiyoung; Iremadze, Nika; Lithwick-Yanai, Gila; Lipson, Doron; Satija, Rahul

Atlas-scale single-cell DNA methylation profiling with sciMETv3

利用 sciMETv3 进行图谱级单细胞 DNA 甲基化分析

Ruth V Nichols ,Lauren E Rylaarsdam ,Brendan L O'Connell ,Zohar Shipony ,Nika Iremadze ,Sonia N Acharya ,Andrew C Adey

Correction: Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

更正:开发并广泛测序了经广泛认可的“瓶中基因组”匹配的肿瘤-正常样本对

McDaniel, Jennifer H; Patel, Vaidehi; Olson, Nathan D; He, Hua-Jun; He, Zhiyong; Cole, Kenneth D; Gooden, Alexander A; Schmitt, Anthony; Sikkink, Kristin; Sedlazeck, Fritz J; Doddapaneni, Harsha; Jhangiani, Shalini N; Muzny, Donna M; Gingras, Marie-Claude; Mehta, Heer; Behera, Sairam; Paulin, Luis F; Hastie, Alex R; Yu, Hung-Chun; Weigman, Victor; Rojas, Alison; Kennedy, Katie; Remington, Jamie; Salas-González, Isai; Sudkamp, Mitch; Wiseman, Kelly; Lajoie, Bryan R; Levy, Shawn; Jain, Miten; Akeson, Stuart; Narzisi, Giuseppe; Steinsnyder, Zoe; Reeves, Catherine; Shelton, Jennifer; Kingan, Sarah B; Lambert, Christine; Baybayan, Primo; Wenger, Aaron M; McLaughlin, Ian J; Adamson, Aaron; Kingsley, Christopher; Wescott, Melanie; Kim, Young; Paten, Benedict; Park, Jimin; Violich, Ivo; Miga, Karen H; Gardner, Joshua; McNulty, Brandy; Rosen, Gail L; McCoy, Rajiv; Brundu, Francesco; Sayyari, Erfan; Scheffler, Konrad; Truong, Sean; Catreux, Severine; Hannah, Lesley Chapman; Lipson, Doron; Benjamin, Hila; Iremadze, Nika; Soifer, Ilya; Krieger, Gat; Eacker, Stephen; Wood, Mary; Cross, Erin; Husar, Greg; Gross, Stephen; Vernich, Michael; Kolmogorov, Mikhail; Ahmad, Tanveer; Keskus, Ayse G; Bryant, Asher; Thibaud-Nissen, Francoise; Trow, Jonathan; Proszynski, Jacqueline; Hirschberg, Jeremy Wain; Ryon, Krista; Mason, Christopher E; Bhakta, Mital S; Sanborn, J Zachary; Munding, Elizabeth M; Wagner, Justin; Xiao, Chunlin; Liss, Andrew S; Zook, Justin M

Development and extensive sequencing of a broadly-consented Genome in a Bottle matched tumor-normal pair

开发并广泛测序经广泛认可的“瓶中基因组”匹配的肿瘤-正常组织对

Jennifer H McDaniel ,Vaidehi Patel ,Nathan D Olson ,Hua-Jun He ,Zhiyong He ,Kenneth D Cole ,Alexander A Gooden ,Anthony Schmitt ,Kristin Sikkink ,Fritz J Sedlazeck ,Harsha Doddapaneni ,Shalini N Jhangiani ,Donna M Muzny ,Marie-Claude Gingras ,Heer Mehta ,Sairam Behera ,Luis F Paulin ,Alex R Hastie ,Hung-Chun Yu ,Victor Weigman ,Alison Rojas ,Katie Kennedy ,Jamie Remington ,Isai Salas-González ,Mitch Sudkamp ,Kelly Wiseman ,Bryan R Lajoie ,Shawn Levy ,Miten Jain ,Stuart Akeson ,Giuseppe Narzisi ,Zoe Steinsnyder ,Catherine Reeves ,Jennifer Shelton ,Sarah B Kingan ,Christine Lambert ,Primo Baybayan ,Aaron M Wenger ,Ian J McLaughlin ,Aaron Adamson ,Christopher Kingsley ,Melanie Wescott ,Young Kim ,Benedict Paten ,Jimin Park ,Ivo Violich ,Karen H Miga ,Joshua Gardner ,Brandy McNulty ,Gail L Rosen ,Rajiv McCoy ,Francesco Brundu ,Erfan Sayyari ,Konrad Scheffler ,Sean Truong ,Severine Catreux ,Lesley Chapman Hannah ,Doron Lipson ,Hila Benjamin ,Nika Iremadze ,Ilya Soifer ,Gat Krieger ,Stephen Eacker ,Mary Wood ,Erin Cross ,Greg Husar ,Stephen Gross ,Michael Vernich ,Mikhail Kolmogorov ,Tanveer Ahmad ,Ayse G Keskus ,Asher Bryant ,Francoise Thibaud-Nissen ,Jonathan Trow ,Jacqueline Proszynski ,Jeremy Wain Hirschberg ,Krista Ryon ,Christopher E Mason ,Mital S Bhakta ,J Zachary Sanborn ,Elizabeth M Munding ,Justin Wagner ,Chunlin Xiao # ,Andrew S Liss # ,Justin M Zook #

An automated ATAC-seq method reveals sequence determinants of transcription factor dose response in the open chromatin

一种自动化的ATAC-seq方法揭示了开放染色质中转录因子剂量反应的序列决定因素

Liu, Betty B; Shimasawa, Masaru; Vermeulen, Sidney; Kim, Samuel H; Iremadze, Nika; Lipson, Doron; Shipony, Zohar; Greenleaf, William J

Mostly natural sequencing-by-synthesis for scRNA-seq using Ultima sequencing

主要采用天然合成测序法进行单细胞RNA测序(scRNA-seq),并使用Ultima测序仪进行测序。

Sean K Simmons # ,Gila Lithwick-Yanai # ,Xian Adiconis # ,Florian Oberstrass ,Nika Iremadze ,Kathryn Geiger-Schuller ,Pratiksha I Thakore ,Chris J Frangieh ,Omer Barad ,Gilad Almogy ,Orit Rozenblatt-Rosen ,Aviv Regev ,Doron Lipson ,Joshua Z Levin

Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq

利用基因组规模的扰动测序技术绘制信息丰富的基因型-表型图谱

Joseph M Replogle ,Reuben A Saunders ,Angela N Pogson ,Jeffrey A Hussmann ,Alexander Lenail ,Alina Guna ,Lauren Mascibroda ,Eric J Wagner ,Karen Adelman ,Gila Lithwick-Yanai ,Nika Iremadze ,Florian Oberstrass ,Doron Lipson ,Jessica L Bonnar ,Marco Jost ,Thomas M Norman ,Jonathan S Weissman

Care of patients with inborn errors of immunity in thirty J Project countries between 2004 and 2021

2004年至2021年间,30个J项目国家先天性免疫缺陷患者的护理情况

Abolhassani, Hassan; Avcin, Tadej; Bahceciler, Nerin; Balashov, Dmitry; Bata, Zsuzsanna; Bataneant, Mihaela; Belevtsev, Mikhail; Bernatowska, Ewa; Bidló, Judit; Blazsó, Péter; Boisson, Bertrand; Bolkov, Mikhail; Bondarenko, Anastasia; Boyarchuk, Oksana; Bundschu, Anna; Casanova, Jean-Laurent; Chernishova, Liudmyla; Ciznar, Peter; Csürke, Ildikó; Erdős, Melinda; Farkas, Henriette; Fomina, Daria S; Galal, Nermeen; Goda, Vera; Guner, Sukru Nail; Hauser, Péter; Ilyina, Natalya I; Iremadze, Teona; Iritsyan, Sevan; Ismaili-Jaha, Vlora; Jesenak, Milos; Kelecic, Jadranka; Keles, Sevgi; Kindle, Gerhard; Kondratenko, Irina V; Kostyuchenko, Larysa; Kovzel, Elena; Kriván, Gergely; Kuli-Lito, Georgina; Kumánovics, Gábor; Kurjane, Natalja; Latysheva, Elena A; Latysheva, Tatiana V; Lázár, István; Markelj, Gasper; Markovic, Maja; Maródi, László; Mammadova, Vafa; Medvecz, Márta; Miltner, Noémi; Mironska, Kristina; Modell, Fred; Modell, Vicki; Mosdósi, Bernadett; Mukhina, Anna A; Murdjeva, Marianna; Műzes, Györgyi; Nabieva, Umida; Nasrullayeva, Gulnara; Naumova, Elissaveta; Nagy, Kálmán; Onozó, Beáta; Orozbekova, Bubusaira; Pac, Malgorzata; Pagava, Karaman; Pampura, Alexander N; Pasic, Srdjan; Petrosyan, Mery; Petrovic, Gordana; Pocek, Lidija; Prodeus, Andrei P; Reisli, Ismail; Ress, Krista; Rezaei, Nima; Rodina, Yulia A; Rumyantsev, Alexander G; Sciuca, Svetlana; Sediva, Anna; Serban, Margit; Sharapova, Svetlana; Shcherbina, Anna; Sitkauskiene, Brigita; Snimshchikova, Irina; Spahiu-Konjusha, Shqipe; Szolnoky, Miklós; Szűcs, Gabriella; Toplak, Natasa; Tóth, Beáta; Tsyvkina, Galina; Tuzankina, Irina; Vlasova, Elena; Volokha, Alla