日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Advancing long-read nanopore genome assembly and accurate variant calling for rare disease detection

推进长读长纳米孔基因组组装和精确变异检测,以用于罕见病检测

Shloka Negi ,Sarah L Stenton ,Seth I Berger ,Paolo Canigiula ,Brandy McNulty ,Ivo Violich ,Joshua Gardner ,Todd Hillaker ,Sara M O'Rourke ,Melanie C O'Leary ,Elizabeth Carbonell ,Christina Austin-Tse ,Gabrielle Lemire ,Jillian Serrano ,Brian Mangilog ,Grace VanNoy ,Mikhail Kolmogorov ,Eric Vilain ,Anne O'Donnell-Luria ,Emmanuèle Délot ,Karen H Miga ,Jean Monlong ,Benedict Paten

Monitoring intracellular replication dynamics unveils high proportion of non-replicating antibiotic-tolerant Staphylococcus aureus inside osteoblasts

监测细胞内复制动态发现,成骨细胞内存在高比例的非复制型耐抗生素金黄色葡萄球菌

Marro, Florian C; Brocard, Jacques; Faure, Allison; Sion, Angélique; Verhoeven, Paul O; Canonne-Desbiolles, Laurie; Conraux, Laurence; Jaffrelot, Laura; Monlong, Chantal; Blocker, Ariel J; Dubarry, Nelly; Laurent, Frédéric; Josse, Jérôme

Rapid, accurate long- and short-read mapping to large pangenome graphs with vg Giraffe

使用 vg Giraffe 实现快速、准确的长读和短读比对到大型泛基因组图谱。

Chang, Xian; Novak, Adam M; Eizenga, Jordan M; Sirén, Jouni; Monlong, Jean; Negi, Shloka; Andreace, Francesco; Nag, Sagorika; Kyriakidis, Konstantinos; Hickey, Glenn; Hwang, Stephen; Délot, Emmanuèle C; Carroll, Andrew; Shafin, Kishwar; Chang, Pi-Chuan; Okamoto, Faith; Paten, Benedict

Rapid, accurate long- and short-read mapping to large pangenome graphs with vg Giraffe

使用 vg Giraffe 实现快速、准确的长读和短读比对到大型泛基因组图谱。

Chang, Xian; Novak, Adam M; Eizenga, Jordan M; Sirén, Jouni; Monlong, Jean; Negi, Shloka; Andreace, Francesco; Nag, Sagorika; Kyriakidis, Konstantinos; Hickey, Glenn; Hwang, Stephen; Délot, Emmanuèle C; Carroll, Andrew; Shafin, Kishwar; Chang, Pi-Chuan; Okamoto, Faith; Paten, Benedict

Pangenome graph construction from genome alignments with Minigraph-Cactus

利用 Minigraph-Cactus 从基因组比对构建泛基因组图

Hickey, Glenn; Monlong, Jean; Ebler, Jana; Novak, Adam M; Eizenga, Jordan M; Gao, Yan; Marschall, Tobias; Li, Heng; Paten, Benedict

Personalized pangenome references

个性化泛基因组参考

Sirén, Jouni; Eskandar, Parsa; Ungaro, Matteo Tommaso; Hickey, Glenn; Eizenga, Jordan M; Novak, Adam M; Chang, Xian; Chang, Pi-Chuan; Kolmogorov, Mikhail; Carroll, Andrew; Monlong, Jean; Paten, Benedict

Beyond the Human Genome Project: The Age of Complete Human Genome Sequences and Pangenome References

超越人类基因组计划:完整人类基因组序列和泛基因组参考的时代

Taylor, Dylan J; Eizenga, Jordan M; Li, Qiuhui; Das, Arun; Jenike, Katharine M; Kenny, Eimear E; Miga, Karen H; Monlong, Jean; McCoy, Rajiv C; Paten, Benedict; Schatz, Michael C

Evolution of chromosome-arm aberrations in breast cancer through genetic network rewiring

通过基因网络重连,乳腺癌中染色体臂畸变的演变

Elena Kuzmin ,Toby M Baker ,Tom Lesluyes ,Jean Monlong ,Kento T Abe ,Paula P Coelho ,Michael Schwartz ,Joseph Del Corpo ,Dongmei Zou ,Genevieve Morin ,Alain Pacis ,Yang Yang ,Constanza Martinez ,Jarrett Barber ,Hellen Kuasne ,Rui Li ,Mathieu Bourgey ,Anne-Marie Fortier ,Peter G Davison ,Atilla Omeroglu ,Marie-Christine Guiot ,Quaid Morris ,Claudia L Kleinman ,Sidong Huang ,Anne-Claude Gingras ,Jiannis Ragoussis ,Guillaume Bourque ,Peter Van Loo ,Morag Park

Phased nanopore assembly with Shasta and modular graph phasing with GFAse

利用Shasta进行相控纳米孔组装,利用GFase进行模块化图相控。

Ryan Lorig-Roach ,Melissa Meredith ,Jean Monlong ,Miten Jain ,Hugh E Olsen ,Brandy McNulty ,David Porubsky ,Tessa G Montague ,Julian K Lucas ,Chris Condon ,Jordan M Eizenga ,Sissel Juul ,Sean K McKenzie ,Sara E Simmonds ,Jimin Park ,Mobin Asri ,Sergey Koren ,Evan E Eichler ,Richard Axel ,Bruce Martin ,Paolo Carnevali ,Karen H Miga ,Benedict Paten

Mapping the scientific output of organoids for animal and human modeling infectious diseases: a bibliometric assessment

利用类器官构建动物和人类传染病模型:一项文献计量学评估

Yan, Jin; Monlong, Jean; Cougoule, Céline; Lacroix-Lamandé, Sonia; Wiedemann, Agnès