日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Range extender mediates long-distance enhancer activity

范围扩展器介导远距离增强子活性

Bower, Grace; Hollingsworth, Ethan W; Jacinto, Sandra H; Alcantara, Joshua A; Clock, Benjamin; Cao, Kaitlyn; Liu, Mandy; Dziulko, Adam; Alcaina-Caro, Ana; Xu, Qianlan; Skowronska-Krawczyk, Dorota; Lopez-Rios, Javier; Dickel, Diane E; Bardet, Anaïs F; Pennacchio, Len A; Visel, Axel; Kvon, Evgeny Z

In vivo mapping of mutagenesis sensitivity of human enhancers

人类增强子诱变敏感性的体内定位

Kosicki, Michael; Zhang, Boyang; Hecht, Vivian; Pampari, Anusri; Cook, Laura E; Slaven, Neil; Akiyama, Jennifer A; Plajzer-Frick, Ingrid; Novak, Catherine S; Kato, Momoe; Tran, Stella; Hunter, Riana D; von Maydell, Kianna; Barton, Sarah; Beckman, Erik; Zhu, Yiwen; Dickel, Diane E; Kundaje, Anshul; Visel, Axel; Pennacchio, Len A

Massively parallel reporter assays and mouse transgenic assays provide correlated and complementary information about neuronal enhancer activity.

大规模平行报告基因检测和转基因小鼠检测提供了关于神经元增强子活性的相关和互补信息

Kosicki Michael, Laboy Cintrón Dianne, Keukeleire Pia, Schubach Max, Page Nicholas F, Georgakopoulos-Soares Ilias, Akiyama Jennifer A, Plajzer-Frick Ingrid, Novak Catherine S, Kato Momoe, Hunter Riana D, von Maydell Kianna, Barton Sarah, Godfrey Patrick, Beckman Erik, Sanders Stephan J, Kircher Martin, Pennacchio Len A, Ahituv Nadav

VISTA Enhancer browser: an updated database of tissue-specific developmental enhancers

VISTA增强子浏览器:组织特异性发育增强子的最新数据库

Kosicki, Michael; Baltoumas, Fotis A; Kelman, Guy; Boverhof, Joshua; Ong, Yeongshnn; Cook, Laura E; Dickel, Diane E; Pavlopoulos, Georgios A; Pennacchio, Len A; Visel, Axel

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues.

小鼠胚胎组织中三维基因组和表观基因组的整合分析

Yu Miao, Zemke Nathan R, Chen Ziyin, Juric Ivan, Hu Rong, Raviram Ramya, Abnousi Armen, Fang Rongxin, Zhang Yanxiao, Gorkin David U, Li Yang E, Zhao Yuan, Lee Lindsay, Mishra Shreya, Schmitt Anthony D, Qiu Yunjiang, Dickel Diane E, Visel Axel, Pennacchio Len A, Hu Ming, Ren Bing

Creb5 controls its own expression and directly induces the joint interzone regulatory program

Creb5 控制自身表达并直接诱导联合区间调控程序

Zhang, Cheng-Hai; Shahini, Aref; Cook, Laura E; Mistry, Meeta; Kim, Jongkil; Wick, Heather; Pennacchio, Len A; Lassar, Andrew B

ChromBPNet: bias factorized, base-resolution deep learning models of chromatin accessibility reveal cis-regulatory sequence syntax, transcription factor footprints and regulatory variants

ChromBPNet:基于偏差分解的、碱基分辨率的染色质可及性深度学习模型揭示顺式调控序列语法、转录因子足迹和调控变异

Pampari, Anusri; Shcherbina, Anna; Kvon, Evgeny Z; Kosicki, Michael; Nair, Surag; Kundu, Soumya; Kathiria, Arwa S; Risca, Viviana I; Kuningas, Kristiina; Alasoo, Kaur; Greenleaf, William James; Pennacchio, Len A; Kundaje, Anshul

Large-scale discovery of neural enhancers for cis-regulation therapies

大规模发现用于顺式调控疗法的神经增强剂

McDiarmid, Troy A; Page, Nicholas F; Chardon, Florence M; Daza, Riza M; Chen, George T; Kosicki, Michael; James, Lucas M; Nourie, Hannah C; Laboy-Cintrón, Dianne; Lee, Arthur S; Vij, Paula; Calderon, Diego; Lalanne, Jean-Benoît; Martin, Beth K; Fink, Kyle; Talkowski, Michael E; Muotri, Alysson R; Philpot, Benjamin D; Pennacchio, Len A; Geschwind, Daniel H; Sanders, Stephan J; Ahituv, Nadav; Shendure, Jay

SOX2-VSX2 Co-Occupancy Shapes Retinal Neurogenesis Through Dynamic Chromatin Regulation.

SOX2-VSX2 共定位通过动态染色质调控塑造视网膜神经发生

Bian Fuyun, Golestaneh Kimiasadat, Davis Emily, Khan Abdullah, Daghsni Marwa, Flohr Keevon, Liu Silvia, da Silva Susana, Pennacchio Len, Aldiri Issam

A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders

一种基于细胞类型的框架,用于识别孟德尔遗传调控障碍中的非编码变异。

Lee, Arthur S; Ayers, Lauren J; Kosicki, Michael; Chan, Wai-Man; Fozo, Lydia N; Pratt, Brandon M; Collins, Thomas E; Zhao, Boxun; Rose, Matthew F; Sanchis-Juan, Alba; Fu, Jack M; Wong, Isaac; Zhao, Xuefang; Tenney, Alan P; Lee, Cassia; Laricchia, Kristen M; Barry, Brenda J; Bradford, Victoria R; Jurgens, Julie A; England, Eleina M; Lek, Monkol; MacArthur, Daniel G; Lee, Eunjung Alice; Talkowski, Michael E; Brand, Harrison; Pennacchio, Len A; Engle, Elizabeth C