日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

De novo basecalling of RNA modifications at single molecule and nucleotide resolution

在单分子和核苷酸分辨率下对 RNA 修饰进行从头碱基调用

Sonia Cruciani #, Anna Delgado-Tejedor #, Leszek P Pryszcz #, Rebeca Medina, Laia Llovera, Eva Maria Novoa

The RMaP challenge of predicting RNA modifications by nanopore sequencing

利用纳米孔测序预测RNA修饰的RMaP挑战

Spangenberg, Jannes; Mündnich, Stefan; Busch, Anne; Pastore, Stefan; Wierczeiko, Anna; Goettsch, Winfried; Dietrich, Vincent; Pryszcz, Leszek P; Cruciani, Sonia; Novoa, Eva Maria; Joshi, Kandarp; Perera, Ranjan; Di Giorgio, Salvatore; Arrubarrena, Paola; Tellioglu, Irem; Poon, Chi-Lam; Wan, Yuk Kei; Göke, Jonathan; Hildebrandt, Andreas; Dieterich, Christoph; Helm, Mark; Marz, Manja; Gerber, Susanne; Alagna, Nicolo

Rapid and accurate demultiplexing of direct RNA nanopore sequencing data with SeqTagger.

利用 SeqTagger 对直接 RNA 纳米孔测序数据进行快速、准确的解复用

Pryszcz Leszek P, Diensthuber Gregor, Llovera Laia, Medina Rebeca, Delgado-Tejedor Anna, Cozzuto Luca, Ponomarenko Julia, Novoa Eva Maria

Quantitative analysis of tRNA abundance and modifications by nanopore RNA sequencing

通过纳米孔 RNA 测序定量分析 tRNA 丰度和修饰

Morghan C Lucas #, Leszek P Pryszcz #, Rebeca Medina, Ivan Milenkovic, Noelia Camacho, Virginie Marchand, Yuri Motorin, Lluís Ribas de Pouplana, Eva Maria Novoa

Enhanced detection of RNA modifications and read mapping with high-accuracy nanopore RNA basecalling models.

利用高精度纳米孔RNA碱基识别模型增强RNA修饰的检测和读取比对

Diensthuber Gregor, Pryszcz Leszek P, Llovera Laia, Lucas Morghan C, Delgado-Tejedor Anna, Cruciani Sonia, Roignant Jean-Yves, Begik Oguzhan, Novoa Eva Maria

Genome analysis of five recently described species of the CUG-Ser clade uncovers Candida theae as a new hybrid lineage with pathogenic potential in the Candida parapsilosis species complex

对近期描述的 CUG-Ser 分支的五个物种进行基因组分析,揭示了念珠菌属(Candida)的一个新杂交谱系——茶念珠菌(Candida theae),该谱系在近平滑念珠菌(Candida parapsilosis)物种复合群中具有致病潜力。

Mixão, Verónica; Del Olmo, Valentina; Hegedűsová, Eva; Saus, Ester; Pryszcz, Leszek; Cillingová, Andrea; Nosek, Jozef; Gabaldón, Toni

Epigenetic Response of Yarrowia lipolytica to Stress: Tracking Methylation Level and Search for Methylation Patterns via Whole-Genome Sequencing

解脂耶氏酵母对应激的表观遗传反应:通过全基因组测序追踪甲基化水平并寻找甲基化模式

Monika Kubiak-Szymendera, Leszek P Pryszcz, Wojciech Białas, Ewelina Celińska

Genome analysis of Candida subhashii reveals its hybrid nature and dual mitochondrial genome conformations

对苏氏假丝酵母的基因组分析揭示了其杂交特性和双重线粒体基因组构型

Mixão, Verónica; Hegedűsová, Eva; Saus, Ester; Pryszcz, Leszek P; Cillingová, Andrea; Nosek, Jozef; Gabaldón, Toni

MetaPhOrs 2.0: integrative, phylogeny-based inference of orthology and paralogy across the tree of life

MetaPhOrs 2.0:基于系统发育的生命之树中直系同源和旁系同源关系的整合推断

Chorostecki, Uciel; Molina, Manuel; Pryszcz, Leszek P; Gabaldón, Toni

MasterOfPores: A Workflow for the Analysis of Oxford Nanopore Direct RNA Sequencing Datasets

MasterOfPores:用于分析牛津纳米孔直接RNA测序数据集的工作流程

Cozzuto, Luca; Liu, Huanle; Pryszcz, Leszek P; Pulido, Toni Hermoso; Delgado-Tejedor, Anna; Ponomarenko, Julia; Novoa, Eva Maria