日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Systematic evaluation of single-cell multimodal data integration enhances cell type resolution and discovery of clinically relevant states in complex tissues

对单细胞多模态数据整合进行系统性评估,可提高细胞类型分辨率,并有助于发现复杂组织中具有临床意义的状态。

Acera-Mateos, Mario; Adiconis, Xian; Li, Jessica-Kanglin; Marchese, Domenica; Caratù, Ginevra; Hon, Chung-Chau; Tiwari, Prabha; Kojima, Miki; Vieth, Beate; Murphy, Michael A; Simmons, Sean K; Lefevre, Thomas; Claes, Irene; O'Connor, Christopher L; Menon, Rajasree; Otto, Edgar A; Ando, Yoshinari; Vandereyken, Katy; Kretzler, Matthias; Bitzer, Markus; Fraenkel, Ernest; Voet, Thierry; Enard, Wolfgang; Carninci, Piero; Heyn, Holger; Levin, Joshua Z; Mereu, Elisabetta

Author Correction: Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types

作者更正:异时共生通过改变多种细胞类型中的衰老特征来重编程小鼠大脑转录组

Ximerakis, Methodios; Holton, Kristina M; Giadone, Richard M; Ozek, Ceren; Saxena, Monika; Santiago, Samara; Adiconis, Xian; Dionne, Danielle; Nguyen, Lan; Shah, Kavya M; Goldstein, Jill M; Gasperini, Caterina; Gampierakis, Ioannis A; Lipnick, Scott L; Simmons, Sean K; Buchanan, Sean M; Wagers, Amy J; Regev, Aviv; Levin, Joshua Z; Rubin, Lee L

Human brain organoids record the passage of time over multiple years in culture

人类脑类器官记录了培养多年期间的时间流逝

Faravelli, Irene; Antón-Bolaños, Noelia; Wei, Anqi; Faits, Tyler; Sampath Kumar, Abhishek; Andreadis, Sophia; Kastli, Rahel; Montero Crespo, Marta; Steiger, Mara; Leible, Daniel; Zhang, Elizabeth; An, Bobae; Meirovitch, Yaron; Silwal, Sayara; Yang, Sung Min; Kovacsovics, Alexander; Adiconis, Xian; Kretzmer, Helene; Levin, Joshua Z; Boyden, Edward S; Lichtman, Jeff; Regev, Aviv; Meissner, Alexander; Arlotta, Paola

Systematic evaluation of single-cell multimodal data integration for comprehensive human reference atlas.

对单细胞多模态数据整合进行系统评价,以构建全面的人类参考图谱

Acera-Mateos Mario, Adiconis Xian, Li Jessica-Kanglin, Marchese Domenica, Caratù Ginevra, Hon Chung-Chau, Tiwari Prabha, Kojima Miki, Vieth Beate, Murphy Michael A, Simmons Sean K, Lefevre Thomas, Claes Irene, O'Connor Christopher L, Menon Rajasree, Otto Edgar A, Ando Yoshinari, Vandereyken Katy, Kretzler Matthias, Bitzer Markus, Fraenkel Ernest, Voet Thierry, Enard Wolfgang, Carninci Piero, Heyn Holger, Levin Joshua Z, Mereu Elisabetta

Brain Chimeroids reveal individual susceptibility to neurotoxic triggers

脑嵌合体揭示个体对神经毒性触发因素的敏感性

Noelia Antón-Bolaños #, Irene Faravelli #, Tyler Faits, Sophia Andreadis, Rahel Kastli, Sebastiano Trattaro, Xian Adiconis, Anqi Wei, Abhishek Sampath Kumar, Daniela J Di Bella, Matthew Tegtmeyer, Ralda Nehme, Joshua Z Levin, Aviv Regev, Paola Arlotta

Experimental and Computational Methods for Allelic Imbalance Analysis from Single-Nucleus RNA-seq Data

单核 RNA 测序数据等位基因不平衡分析的实验和计算方法

Sean K Simmons, Xian Adiconis, Nathan Haywood, Jacob Parker, Zechuan Lin, Zhixiang Liao, Idil Tuncali, Aziz M Al'Khafaji, Asa Shin, Karthik Jagadeesh, Kirk Gosik, Michael Gatzen, Jonathan T Smith, Daniel N El Kodsi, Yuliya Kuras, Clare Baecher-Allan, Geidy E Serrano, Thomas G Beach, Kiran Garimella,

Mostly natural sequencing-by-synthesis for scRNA-seq using Ultima sequencing

主要采用天然合成测序法进行单细胞RNA测序(scRNA-seq),并使用Ultima测序仪进行测序。

Sean K Simmons # ,Gila Lithwick-Yanai # ,Xian Adiconis # ,Florian Oberstrass ,Nika Iremadze ,Kathryn Geiger-Schuller ,Pratiksha I Thakore ,Chris J Frangieh ,Omer Barad ,Gilad Almogy ,Orit Rozenblatt-Rosen ,Aviv Regev ,Doron Lipson ,Joshua Z Levin

Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types

异时共生通过改变多种细胞类型中的衰老特征来重编程小鼠大脑转录组

Methodios Ximerakis # ,Kristina M Holton # ,Richard M Giadone ,Ceren Ozek ,Monika Saxena ,Samara Santiago ,Xian Adiconis ,Danielle Dionne ,Lan Nguyen ,Kavya M Shah ,Jill M Goldstein ,Caterina Gasperini ,Ioannis A Gampierakis ,Scott L Lipnick ,Sean K Simmons ,Sean M Buchanan ,Amy J Wagers ,Aviv Regev ,Joshua Z Levin ,Lee L Rubin

The effect of background noise and its removal on the analysis of single-cell expression data

背景噪声及其消除对单细胞表达数据分析的影响

Philipp Janssen, Zane Kliesmete, Beate Vieth, Xian Adiconis, Sean Simmons, Jamie Marshall, Cristin McCabe, Holger Heyn, Joshua Z Levin, Wolfgang Enard, Ines Hellmann

Cell-type specific defects in PTEN-mutant cortical organoids converge on abnormal circuit activity

PTEN 突变皮质类器官中细胞类型特异性缺陷导致异常电路活动

Martina Pigoni, Ana Uzquiano, Bruna Paulsen, Amanda J Kedaigle, Sung Min Yang, Panagiotis Symvoulidis, Xian Adiconis, Silvia Velasco, Rafaela Sartore, Kwanho Kim, Ashley Tucewicz, Sarah Yoshimi Tropp, Kalliopi Tsafou, Xin Jin, Lindy Barrett, Fei Chen, Edward S Boyden, Aviv Regev, Joshua Z Levin, Pao